What’s Up Weill? – Newsletter Archives
February 2025
FAREWELL
- Manuela Alvarado Obando, Research Support, Doerr Lab
- Mateo Torres, Postdoctoral Associate, Yu Lab
RECENT PUBLICATIONS
Smolka Lab
- Will Comstock: Profiling Tel1 Signaling Reveals a Non-Canonical Motif Targeting DNA Repair and Telomere Control Machineries
Yu Lab
- Yingying Zhang: A multiscale functional map of somatic mutations in cancer integrating protein structure and network topology
RECENT GRANT AWARDS
Roeder Lab
- U.S.-Israel Binational Science Foundation (BSF): “A quantitative approach to reveal inter-tissue cell growth coordination and its molecular readout”
UPCOMING EVENTS
Wednesday, February 19
- BMCB Grad Seminar (12:15pm, Stocking Hall 146) – Yiting Cao (Smolka Lab): Mechanisms Controlling DNA Replication Fork Restart
Thursday, February 20
- Microbiology Grad Seminar (11:15am, Morrison Hall B82) – Facundo Torres (Doerr Lab)
- Weill Institute Social Hour (4:15am, WH 421) *NOTE LATER TIME! Take a break from the lab to enjoy snacks, drinks, and games!
Wednesday, February 26
- BMCB Grad Seminar (12:15, Stocking Hall 146) –Nicolas Vergara Ruiz (Han Lab)
- REAP Workshop (3pm, WH 226) – Luke Arnce (Aquadro Lab): Comparative Analysis of Protein Structures using AlphaFold and ChimeraX Registration is required! Sign up here.
Friday, February 28
- Comp Bio Grad Seminar (2pm, WH 224) – Yutong Zhu & Yilin Liu (Yu Lab)
Wednesday, March 5
- Molecular Cell Bio Group (4pm, Wh 226) – Haiyuan Yu
Thursday, March 6
- Center for Innovative Proteomics Journal Club (11am, WH 321) Special Tutorial Edition: DIA-NN and FragPipe and quantitative proteomics data evaluation, presented by Yu ‘Charlie’ Sun & Yugandhar Kumar (Yu Lab) CIP Journal Club is looking for presenters for April, May and June 2025! Sign up here to present an article or technology.
- Microbiology Grad Seminar (11:15am, Morrison Hall B82) – Nadia Nikulin (Doerr Lab)
Wednesday, March 12
- BMCB Grad Seminar (12:15pm, Stocking Hall 146) – Shrijan Bhattarai (Smolka Lab)
Thursday, March 13
- Cornell Giving Day – Donor gifts can ignite the future of discovery. Beginning February 27th, watch for an email with details on how you can encourage your friends, family, and colleagues to join in supporting the Weill Institute’s mission. Spread the word and make an impact!
Friday, March 14
- Comp Bio Grad Seminar (2pm, 224 Weill Hall) – Yu ‘Charlie’ Sun (Yu Lab)
- REAP Workshop (12pm, WH 226) – Justin Paek (Paszek Lab): Deep Learning for Microscopy Image Analysis. Stay tuned for talk details and registration link!
Monday, March 17
- GGD Grad Seminar (12:15pm, 101 Bradfield) – Khoula Jaber (Smolka Lab)
Have an event that you’d like included on our WICMB Calendar? Email wicmb_admin@cornell.edu with the details!
Members of 31 labs attended the most recent Weill Institute REAP seminar, Introduction to single-cell RNA sequencing analysis for wet lab scientists, given by Garrett Beeghly (Fischbach Lab).
January 2025
WELCOME
- Yugandhar Kumar, Research Associate, Yu Lab
- Grace Ritter, Administrative Assistant
- Crane Lab Members🎉
- Brian Crane, Professor and Director
- Dhruva Ajit Nair, Graduate Student
- Herbert Castillo, Graduate Student
- Timothée Chauviré, Research Associate
- James Clark, Graduate Student
- Maithili Despande, Graduate Student
- Robert Dunleavy, Postdoctoral Associate
- Jessica Holechek, Graduate Student
- Michael Lynch, Research Associate
- Nicole Maurici, Postdoctoral Associate
- Alise Muok, Research Associate
- Gideon Smith, Graduate Student
- Daniyal Tariq, Postdoctoral Associate
- Jessica Whittemore, Graduate Student
- Yajie Xu, Graduate Student
- Rebecca Zawistowski, Graduate Student
FAREWELL
- Dylan (Din Chi) Chiu, Grad Student, Baskin Lab
- Payton Ditchfield, Technician, Han Lab
- Giovanna Panessa, Visiting Scientist, Smolka Lab
- Hind Zahr, Postdoctoral Associate, Lammerding Lab
CONGRATULATIONS
- Manuela Alvarado Obando, Doerr Lab: Awarded Doctor of Philosophy degree in Microbiology
- Xinchen Chen, Han Lab: Awarded Doctor of Philosophy degree in Biochemistry, Molecular and Cell Biolog
- Dylan (Din Chi) Chiu, Baskin Lab: Awarded Doctor of Philosophy degree in Chemistry and Chemical Biology
- Shagun Gupta, Yu Lab: Awarded Doctor of Philosophy degree in Computational Biology
- Bokun Xie, Smolka Lab: Awarded Doctor of Philosophy degree in Genetics, Genomics and Development
- Noam Zuela-Sopilniak, Lammerding Lab: Promotion to Research Specialist
RECENT GRANT AWARDS
Lammerding Lab/Yu Lab
- Leducq Foundation for Cardiovascular Research, Transatlantic Networks of Excellence (G. Bonne & A. Landstrom) “PRIORITY: cardio-laminoPathy: fRom pathomechanIsms tO peRsonalIzed TherapY”
UPCOMING EVENTS
- Friday, January 24th, 12:20pm (Plant Science 404 and Zoom, passcode 916540): Plant Bio Seminar – Haiyuan Yu “Mapping whole interactomes and proteomes at single cell (type) level” hosted by Adrienne Roeder
• Friday, January 31st: REAP award application cycle deadline
• Thursday, February 6th, 4pm (Biotech G01): Molecular Cell Bio Group – Dr. Ryan Baldridge (Assistant Professor of Biological Chemistry, University of Michigan) hosted by Carolyn Sevier
• Monday, February 10th, 9:30am (Biotech G01): R3 Group meeting – Smolka Lab presentation
• Friday, February 14th, 12pm (WH 226): REAP Workshop – Garrett Beeghly, BME
• Thursday, February 20th, 4pm (WH 421 Atrium): Weill Institute Social Hour
Have an event that you’d like included on our WICMB Calendar? Email wicmb_admin@cornell.edu with the details!
Weill Institute holiday party shenanigans 😊 (Doerr Lab members, December 2024)
December 2024
Please note that Monday events emails will be on hiatus until January 6th.
FAREWELL
- Rubhadevi Balu, Postdoc, Yu Lab
- Shagun Gupta, Grad Student, Yu Lab
CONGRATULATIONS
- Adrienne Roeder: Promoted from Associate Professor to Professor!
RECENT PUBLICATIONS
Fromme Lab
Hu Lab
- Cha Yang: Regulation of TAR DNA binding protein 43 (TDP-43) homeostasis by cytosolic DNA accumulation
Yu Lab
- Dongjin Lee, Dapeng Xiong: A structurally informed human protein-protein interactome reveals proteome-wide perturbations caused by disease mutations
- Featured in Cornell Chronicle: Powerful AI tool can boost precision medicine, treatments
RECENT GRANT AWARDS
Doerr Lab
- Bill and Melinda Gates Foundation (K. Rhee) “Open AI/ML-assisted bacterial permeability platform”
UPCOMING EVENTS
- Friday, December 20th, 3:30pm–5:30pm: 🎉 Weill Institute Holiday Party at the Statler! 🎉
- Your first drink is on us! After that, please bring cash or a credit card for the bar. We will have yummy appetizers and some fun games/contests also 😊
- Friday, January 10th, 4pm (Caldwell 100): MBG Friday Seminar hosted by Chun Han – Jiefu Li (Group Leader, HHMI Janelia Research Campus)
- Wednesday, January 15th, 4pm (Weill Hall 421): Weill Institute Social Hour – take a break from the lab to enjoy some snacks, drinks, and games!
- Friday, January 31st: REAP award application cycle deadline
Have an event that you’d like included on our WICMB Calendar? Email wicmb_admin@cornell.edu with the details!
Happy holidays to all those celebrating… and best wishes for a new year replete with lots of useful data, grant funding, and joy all around.
November 2024
WELCOME
- Cassandra Ohnmeiss, C&CB Grad Student, Baskin Lab
- Pan Su, Postdoc, Hu Lab
- Jade (Zijun) Xia, C&CB Grad Student, Baskin Lab
FAREWELL
- Caitlin Feller, Administrative Assistant
- Jin Joo Kang, Postdoc, Yu Lab
CONGRATULATIONS
- Inle Bush, Undergraduate Student, Han Lab: Awarded a CAS Undergraduate Research Program award, supporting the project: “Identification of Golgi Outpost Formation and Maturation Pathways in Drosophila melanogaster Neurons”
- Xander Lacrampe, BMCB Grad Student, Hu Lab: Awarded a Graduate School Dean’s Scholars Provost Diversity Fellowship
- Bill Loftus, Weill Institute Director of Operations: Awarded a President’s Awards for Employee Excellence, Thoughtful Leader Award
- Baskin Lab & Roeder Lab: Weill Institute Halloween Door Decorating Contest Winners!
RECENT PUBLICATIONS
Yu Lab
- Dapeng Xiong: A structurally informed human protein-protein interactome reveals proteome-wide perturbations caused by disease mutations
RECENT GRANT AWARDS
Yu Lab
- Bill and Melinda Gates Foundation (P. Cohen) “Identification of novel contraceptive targets in the human ovary”
UPCOMING EVENTS
- Wednesday, November 20th, 4pm (421): Weill Institute Social Hour – take a break from the lab to enjoy some snacks, drinks, and games!
- Friday, November 22nd, 4pm (Biotech G10): MBG Friday Seminar hosted by Marcus Smolka – Alberto Ciccia (Associate Professor, Columbia University) “Dissecting the DNA damage response network”
- Tuesday, December 3rd, 2:30pm (421): Weill Institute DEI Council Meeting – all WICMB members are welcome! Lunch will be provided.
- Thursday, December 5th, 11am (321): CIP@Cornell Journal Club, presentation by Yu Sun (Yu Lab) on this article published in Cell, about advances in identifying early biomarkers of Alzheimer’s disease
- Friday, December 6th, 9am (421): Cell Bio Journal Club, presentation by Isaac Lamptey (Fromme Lab)
- Thursday, December 12th, 4pm (226): Molecular Cell Bio Group, presentation by Dr. Taki Nishimura (Professor, Laboratory for Membrane Systems Biology, Osaka University)
- Friday, December 20th, 3:30pm–5:30pm: 🎉 Weill Institute Holiday Party at the Statler! 🎉 Please RSVP here by December 9th.
🏆 Submit your nominations HERE for our Science & Service Awards 🏆
📸 Submit your best photos HERE for our Photo Contest 📸
Have an event that you’d like included on our WICMB Calendar? Email wicmb_admin@cornell.edu with the details!
Participants from over 20 labs attended a fantastic presentation by Sarah Henretta (Lammerding Lab) – “Quantitative Fluorescence Imaging: Techniques, Experiments, and Data Analysis.” Sarah was awarded a Weill Institute REAP grant, which allowed her to attend Quantitative Florescence Microscopy, a course hosted by MDI Biological Laboratory in May 2024.
October 2024
WELCOME
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- Xuekai Wang, Postdoc, Mao Lab
- Yongzong Yang, Grad Student, Han Lab
- Junke Zhang, Research Support, Yu Lab
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FAREWELL
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- Marcos Navarro, Scientific Operations Manager, Center for Innovative Proteomics, Smolka & Yu Labs
- Bokun Xie, Grad Student, Smolka Lab
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CONGRATULATIONS
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- Scott D. Emr, Samuel C. and Nancy M. Fleming Professor in Molecular and Cell Biology Emeritus: Awarded the 2024 Louisa Gross Horwitz Prize
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RECENT PUBLICATIONS
Crane Lab
Han Lab
Roeder Lab
UPCOMING EVENTS
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- Thursday, October 17th, 4pm (WH 421): Weill Institute Social Hour – join us for snacks, drinks, and fun!
- Friday, October 18th
o 9am (WH 421): Cell Bio Journal Club, presentation by Mingqin Chang (Fromme Lab). Breakfast will be provided.
o 4pm (Biotech G10): MBG Friday Seminar, hosted by Fenghua Hu: Zixu Mao – “An Organelle-Centric View of Neuronal Stress Response and Therapeutics in Parkinson’s Disease” - Tuesday, October 22nd, 12pm (WH 421): Cell Biology Faculty Lunch
- Wednesday, October 23rd, 12:15pm (Caldwell Hall 100) BMCB Student Seminar by Herbert Castillo (Crane Lab)
- Tuesday, October 29th, 12pm (WH 421) Weill Institute Faculty Meeting
- Thursday, October 31st
o 12:30pm (WH 125): REAP Presentation by Sarah Henretta (Lammerding Lab)
o 3pm: Weill Institute Halloween Door Deco Contest! - Friday, November 1st, 9am (WH 421): Cell Bio Journal Club – breakfast provided
- Thursday, November 7th
o 11am (WH 321): CIP@Cornell Journal Club, presentation by Richard Gillilan (Visiting Scientist at Cornell CHESS)
o 4pm (WH 226) Molecular Cell Bio Group, featuring presentations by Will Comstock (Smolka Lab) and Byron Rusnak (Roeder Lab)Nominate a speaker for the 2025 Weill Institute Symposium! This survey will remain open until Friday, October 25th, 2024.
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Have an event that you’d like included on our WICMB Calendar? Email wicmb_admin@cornell.edu with the details!
The Weill Institute is hiring a new faculty member! Please share with your networks.
Molecular Cell Bio Group September 24 meeting – featuring a presentation by Ben Glick (U. Chicago)
August/September 2024
WELCOME
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- Juheon Chu, Computational Biology Grad Student, Yu Lab
- Jared May, Intern, Roeder Lab
- Alex Rose, Technician, Mao/Emr Labs
- Aaron Shipman, Plant Pathology & Plant-Microbe Biology Grad Student, Roeder Lab
- Ikram Ullah, Visiting Scholar, Hu Lab
- Shawn Wang, Microbiology Grad Student, Mao Lab
- Ian Wolff, Postdoc, Smolka Lab
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FAREWELL
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- Bryce Brownfield, Postdoc, Fromme Lab
- Sarah Griffin, Weill Institute Technician
- Shuyao Kong, Grad Student, Roeder Lab
- Junke Zhang, Grad Student, Yu Lab
- Weill Institute Summer Visitors:
- Aubrey Gerhardt, REU Student, Smolka Lab
- Selina Gu, Intern, Han Lab
- Nathan Miller, REU Student, Roeder Lab
- Ellen Pørtner, Visiting Scientist, Lammerding Lab
- Nora Stewart, Intern, Roeder Lab
- Carrington Thompson, REU Student, Roeder Lab
- Shradda Vadodaria, Intern, Baskin Lab
- Nicolas Velasco Sanchez, REU Student,
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CONGRATULATIONS
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- Si Chen, PhD, Roeder/Silberstein Labs: Awarded Fleming Fellowship
- Megan Keller, PhD, Doerr Lab: Awarded CHIMID Fellowship
- Shyuao Kong, PhD, Roeder Lab: Awarded Doctor of Philosophy degree in Plant Science
- Junke Zhang, PhD, Yu Lab: Awarded Doctor of Philosophy degree in Computational Biology
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RECENT PUBLICATIONS
Baskin Lab
Doerr Lab
Han Lab
Lammerding Lab
Mao Lab
RECENT GRANT AWARDS
Doerr Lab
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- NIH National Institute of General Medical Sciences R01 “Molecular mechanisms of peptidoglycan endopeptidase regulation” renewal
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Lammerding Lab
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- NIH National Institute of Arthritis and Musculoskeletal and Skin Diseases R01 “Defining nuclear mechanisms for ultrarapid mechanically induced gene expression”
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Smolka Lab
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- NIH National Institute of Child Health & Human Development R01 (R. Weiss) “Coordination of Atr Signaling for Genetic Quality Control, Silencing, and DNA Repair during Meiosis” renewal
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UPCOMING EVENTS
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- Wednesday, September 18th, 12pm (100 Caldwell Hall): BMCB Student Seminar by Lin Luan (Baskin Lab)
- Wednesday, September 18th, 4pm (WH 421): Community Potluck and Social Hour, hosted by the Weill Institute DEI Council – SIGN UP HERE by Monday 9/16 to bring a dish! Pizza and beverages will also be provided.
- Friday, September 20th, 9am (WH 421): Cell Bio Journal Club, presentation by Shamar Wallace (Fromme Lab) – breakfast will be provided!
- Wednesday, September 25th, 12pm (WH 421): Weill Institute DEI Council Meeting – lunch will be provided
- Monday, September 30th: Deadline for submissions to the REAP award. This travel award is open to all faculty, postdocs, and grad students in Cornell life sciences research labs. Apply here!
- Monday, September 30th, 10am (WH 224): Ph.D. Thesis Defense Seminar by Manuela Alvarado Obando (Doerr Lab)
- Thursday, October 3rd, 4pm (WH 226): Molecular Cell Bio Group, featuring a presentation by Mathew Paszek (Assoc. Prof @ Cornell Smith School of Chemical and Biomolecular Eng.) – with pizza and beer!
- Friday, October 4th, 9am (WH 421): Cell Bio Journal Club – breakfast will be provided!
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Have an event that you’d like included on our WICMB Calendar? Email wicmb_admin@cornell.edu with the details!

July 2024
WELCOME
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- Nora Stewart, Intern, Roeder Lab
- Yubin Wang, Visiting Intern, Han Lab
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CONGRATULATIONS
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- Ryan Vignogna, PhD, Fromme Lab: Awarded NIH NRSA Postdoctoral Fellowship
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RECENT PUBLICATIONS
Baskin Lab
Roeder Lab
Smolka Lab
UPCOMING EVENTS
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- Wednesday, July 24th, 4pm (WH 421): WICMB Social Hour – take a break from the lab to enjoy snacks, drinks and games with your colleagues!
- Wednesday-Thursday, August 14-15: Weill Institute Summer Retreat in Geneva
- Tuesday, August 20th, 12pm (WH 421) DEI Council Meeting – lunch will be served
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Have an event that you’d like included on our WICMB Calendar? Email wicmb_admin@cornell.eduwith the details!
Baskin Bowlin’ – members of the Baskin Lab brave the heat to enjoy bowling during the WICMB DEI Council Family Bowling Night this past June, at Helen Newman Bowling Center.
May/June 2024
WELCOME
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- Michael Ahn, Graduate Student, Hu Lab
- Sarah Griffin, Weill Institute Technician
- Alex Hoff, Graduate Student, Yu Lab
- Elijah Jones, Graduate Student, Doerr Lab
- Tangluo Li, Technician, Han Lab
- Deanna Maybee, Graduate Student, Smolka Lab
- Beth Ryan, Graduate Student, Baskin Lab
- Mamun Sikder, Postdoctoral Associate, Hu Lab
- Shradda Vadodaria, Visiting Intern, Baskin Lab
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FAREWELL
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- Richa Agrawal, Graduate Student, Lammerding Lab
- Christina Breneman, Technician, Han Lab
- Muyun Cui, Visiting Intern, Hu Lab
- Jiaze Liu, Visitng Intern, Emr & Mao Labs
- Ann Yeung, Technician, Han Lab
- Nancy Zylich, Technician, Han Lab
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CONGRATULATIONS
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- Richa Agrawal, PhD, Lammerding Lab: Awarded Doctor of Philosophy degree in Biochemistry, Molecular and Cell Biology
- Xinchen Chen, Graduate Student, Han Lab: Best Talk, 2024 Keck Biomembrane Retreat
- Megan Keller, PhD, Doerr Lab: Awarded Doctor of Philosophy degree in Biomedical & Biological Sciences
- Julia Li, Graduate Student, Baskin Lab: Best Poster Award, 2024 Keck Biomembrane Retreat
- Jacob Odell, Graduate Student, Lammerding Lab: LPS BMCB Best Paper of the Year, 2024 MBG Awards
- Yingying Zhang, PhD, Yu Lab: Awarded Doctor of Philosophy degree in Biophysics
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RECENT PUBLICATIONS
Lammerding Lab
Smolka Lab
RECENT GRANT AWARDS
Roeder Lab
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- University of Florida / National Science Foundation DBI (P. Soltis) “BII: Polyploidy: Integration Across Scales and Biological Systems”
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UPCOMING EVENTS
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- Week of June 24th, 4pm (date TBD): Weill Institute Social Hour
- Outside in the Weill Courtyard; take a break from the lab to enjoy the nice weather with friends, snacks, and drinks!
- Tuesday, June 25th, 12pm (WH 421): WICMB Faculty Meeting (faculty only)
- Friday, July 12th, time TBD (Weill Hall Courtyard) OVPRI Happy New Fiscal Year Celebration
- Open to all Research & Innovation staff, faculty, & trainees!
- Week of June 24th, 4pm (date TBD): Weill Institute Social Hour
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REMINDER: registration for our Institute Summer Retreat in Geneva (August 14-15) is due TODAY, Monday, June 17th. Register now!
Have an event that you’d like included on our WICMB Calendar? Email wicmb_admin@cornell.edu with the details!
Cornell University and Weill Cornell Medical labs came together for a fantastic Keck Biomembrane Retreat this June!
April 2024
WELCOME
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- Lanxi Hu, Postdoctoral Associate, Roeder Lab
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FAREWELL
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- Qiuye Zhao, Postdoctoral Associate, Yu Lab
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CONGRATULATIONS
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- Megan Keller, Doerr Lab: Short-Listed in The Scientist’s inaugural science writing competition “What’s Your Story?”
- Shuyao Kong, Roeder Lab: Awarded the Barbara McClintock Graduate Student Award
- Lilijana Oliver, Roeder Lab: Awarded NSF Graduate Research Fellowship
- Facundo Torres, Doerr Lab: Awarded NSF Graduate Research Fellowship
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RECENT PUBLICATIONS
Baskin Lab
Doerr Lab
Hu Lab
UPCOMING EVENTS
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- Tuesday, April 23rd, 10am (Biotech G10): WICMB and MBG Special Seminar – Maddie Sherlock, New York Structural Biology Center “Molecular mechanisms of translation regulation by viral RNA structures”
- Thursday, April 25th
- 11:15am (Vet Research Tower, T1003-LH3) Microbiology Grad Seminar – Facundo Torres (Doerr Lab)
- 2pm (Weill 226): CIP@Cornell Seminar – Sixue Chen, “Redox proteomics and metabolomics of guard cell immunity and CO2 response”
- 4pm (Weill 224): Biophysics Thesis Defense Seminar – Yingying Zhang (Yu Lab)
- Friday, April 26th, 9am (Weill 421): Cell Bio Journal Club – Mateusz Wagner (Smolka Lab)
- Monday, April 29th
- 10am (Biotech G10): WICMB and MBG Special Seminar – Debo Sardar, Baylor College of Medicine
- 12:15pm (175 Warren Hall) BMCB Grad Seminar – Isaac Lamptey (Fromme Lab)
- Thursday, May 2nd
- 11am (Weill 421): CIP@Cornell Journal Club – Yiwen Wang (Yu Lab)
- 4pm (Weill 226): Molecular Cell Bio Group – Brooks Crickard, MBG
- Friday, May 3rd, 1pm (Weill 226) Comp Bio Graduate Seminar – Li Yao (Yu Lab)
- Monday, May 6th
- 10am (Biotech G10): WICMB and MBG Special Seminar – Seungsoo Kim, Stanford University
- 12:15pm (175 Warren Hall) BMCB Graduate Seminar – Nicolas Vergara Ruiz (Han Lab)
- Tuesday, May 7th, 12pm (Weill 421): Weill Institute Diversity Council Meeting
- Friday, May 10th, 9am (Weill 421): Cell Bio Journal Club
- Monday, May 13th, 10am (Weill 226): WICMB and MBG Special Seminar – Coral Zhou, University of California at Berkeley
- Wednesday, May 15th, 4pm (Weill 4th Floor Atrium): Weill Institute Social Hour
- Thursday, May 16th, 10am (Weill 226): WICMB and MBG Special Seminar – Mustafa Aydogan, University of California at San Francisco
- Monday, May 20th, 10am (Weill 226): WICMB and MBG Special Seminar – Katie Goodwin, MRC Laboratory of Molecular Biology
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Cornell University’s beloved red-tailed hawk family, Big Red and Arthur, admire their four newly laid eggs in their nest near Weill Hall on 3/26/24. Cornell Red-tailed Hawks Live Cam
Weill Institute members observed the Total Eclipse on 4/8/24.
FEBRUARY 2024:
WELCOME NEW WEILL MEMBERS
- Meihan Wei, Graduate Student, Yu Lab
- Tianyu Xia, Graduate Student, Yu Lab
FAREWELL – WE’LL MISS YOU!
- Rhiannon Clements, Technician, Han Lab
- Yugandhar Kumar, Research Associate, Yu Lab
- Sho Suzuki, Research Associate, Emr Lab
- Alice Varlet, Postdoctoral Associate, Lammerding Lab
CONGRATULATIONS
- Sarah Henretta and Wenjie Zeng chosen as Janurary 2024 REAP awardees
RECENT PUBLICATIONS
Bretscher Lab
- Andrew Lombardo: ARHGAP18-ezrin functions as an autoregulatory module for RhoA in the assembly of distinct actin-based structures
Emr Lab
- Sho Suzuki: A role for Vps13-mediated lipid transfer at the ER–endosome contact site in ESCRT-mediated sorting
RECENT GRANT AWARDS
Lammerding Lab
- Leducq Foundation for Cardiovascular Research, Transatlantic Networks of Excellence (L. Carrier & B. Prosser) “Cytoskeletal regulation of cardiomyocyte homeostatsis in health and disease”
Roeder Lab
- National Science Foundation ITE (J. Sabin) “NSF Convergence Accelerator Track M: Bio-Inspired Surface Design for High Performance Mechanical Tracking Solar Collection Skins in Architecture.”
UPCOMING EVENTS
- February 22nd, 2PM (WH 226): CIP@Cornell Seminar by Dr. Yonghao Yu (Columbia University Irving Medical Center) – Targeting Protein Poly-ADP-Ribosylation for the Development of Next Generation PARP Inhibitors. Seminar co-sponsored by Cornell CVM. Light refreshments will be provided!
- February 23rd, 9AM (WH 421): Cell Biology Journal Club. Breakfast will be provided.
- March 5th, 12PM (WH 421): Weill Institute DEI Council Meeting. All are welcome! Lunch will be provided.
- March 7th 4PM (WH 226): Molecular Cell Bio Group, presentation by Doug Anderson (U. Rochester Medical Center) – Pizza provided!
- March 13th, 12PM (Olin 128): CBE Soft Matter Discussions, presentation by Adrienne Roeder. Lunch will be provided.
Participants follow along wtih a demonstration at the REAP Seminar presented by Will Comstock (Smolka Lab)
JANUARY 2024:
HAPPY NEW YEAR, WEILL INSTITUTE!
WELCOME NEW WEILL MEMBERS (since September 1, 2023)
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- Aditya Bhattacharyya, Graduate Student in Baskin Lab
- Minqin Chang, Postdoctoral Associate in Fromme Lab
- Muyun Cui, Visiting Intern in Hu Lab
- Anna Hazelwood, Graduate Student in Lammerding Lab
- Yuding ‘Richard’ Huang, Graduate Student in Baskin Lab
- Giovanna Panessa, Visiting Scientist in Smolka Lab
- Alfred Sun, Undergraduate Communications Assistant, Admin Team
- Yuliang Tang, Postdoctoral Associate in Yu Lab
- Sharad Tat, Postdoctoral Associate in Hu Lab
- Patricia Vila, Undergraduate Communications Assistant, Admin Team
- Xinyu ‘Shawn’ Wang, Visiting Intern in Mao Lab
- Yiwen Wang, Graduate Student in Yu Lab
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FAREWELL – WE’LL MISS YOU! (departures since September 1, 2023)
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- Carolline Ascencao, Smolka Lab
- Jumana Badar, Smolka Lab
- Priscila Castilho Navarro, Yu Lab
- Frances Clark, Roeder Lab
- Andrew Lombardo, Bretscher Lab
- Karim Omar, Yu Lab
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CONGRATULATIONS
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- Carolline Ascencao received the Weill Institute 2023 Outstanding Science Award
- Julie Heffler received Sam and Nancy Fleming Research Fellowship
- Lizzie Korn transferred from Undergraduate to Technician, Han Lab
- Jawuanna McAllister received the Weill Institute 2023 Distinguished Service Award
- Marena Minelli transferred from GRA to Postdoctoral Associate, Mao Lab
- Marcos Navarro promoted from Postdoctoral Associate, Smolka Lab to Scientific Operations Manager, Center for Innovative Proteomics
- Avilash Singh Yadav received Sam and Nancy Fleming Research Fellowship
- Yineng Xu transferred from GRA to Technician, Han Lab
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RECENT PUBLICATIONS (since September 1, 2023)
Fromme Lab
Lammerding Lab
Roeder Lab
RECENT GRANT AWARDS
Roeder Lab
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- CALS Moonshot Seed Grant Award “Adapting a synthetic biology toolbox for use in a non-model diatom”
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Yu Lab
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- Albert Einstein College of Medicine / NIH National Institute on Aging (Vijg) “Genetic Variant-based drug discovery targeting conserved pathways of aging”
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UPCOMING EVENTS
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- January 22nd, 3PM–5PM: Welcome Back Potluck hosted by WICMB DEI Council, Weill Hall 421 and 4th Floor Atrium (SIGN UP HERE TO BRING A DISH!)
- January 29th: REAP grant funding applications due – more information here
- February 1st, 11AM–12PM: CIP@Cornell Journal Club, “Dynamic mapping of proteome trafficking within and between living cells by TransitID” PMID: 36798302 presented by Mateusz Wagner (Smolka Lab), Weill Hall 421
- February 1st, 4PM–5PM: Molecular Cell Bio Group, presentation by Saki Ichikawa, Prof. Chemistry & Chemical Biology, Weill Hall 226 – Pizza provided!
- February 13th, 12PM–2PM: REAP Workshop Series – Targeted Proteomics, “Quantifying Proteins, Peptides, and PTMs with Maximum Sensitivity” presented by Will Comstock (Smolka Lab), Weill Hall 226 – Lunch will be provided!
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WEILL INSTITUTE 2023 SCIENTIFIC PHOTO OF THE YEAR
Congratulations to Julia Li from the Baskin Lab for winning the Best Science Photo of the Year!
Ghost cells escaping the microscope, 2023, colorized
FEBRUARY 2023:
WELCOME
- Rubha Balu: Postdoctoral Associate, Yu Lab
- Claudia Chambliss: Biophysics Graduate Student, Fromme Lab
- Brian Chen: Chemistry & Chemical Biology Graduate Student, Baskin Lab
- Si Chen: ELMI Postdoctoral Associate, Roeder Lab
- Caitlin Feller: Administrative Assistant, Institute Faculty & Grant Support
- Weiguo He: Postdoctoral Associate, Hu Lab
- Sarah Henretta: Biomedical Engineering Graduate Student, Lammerding Lab
- Esha Shakthy: Student Research/Lab Assistant, Lammerding Lab
- Shaozheng Sun: Research Intern, Mao Lab
- Charlie Sun: Computational Biology Graduate Stu
- Yutong Zhu: Computational Biology Graduate Student, Yu Lab
- Maura Zimmermann: Postdoctoral Associate, Roeder Lab
CONGRATULATIONS
- Jumana Badar awarded The Harry & Samuel Mann Outstanding Graduate Student Award
- Trevor Cross transferred from GRA, Doerr Lab to ELMI Postdoctoral Associate, Roeder Lab
- Tobi Dörr promoted to Associate Professor, Microbiology
- Scott Emr received a lifetime achievement award from the American Society for Biochemistry and Molecular Biology (ASBMB)
- Julia Li (Baskin Lab) awarded NSERC Postgraduate Doctoral Scholarship
- Julien Morival (Lammerding Lab) awarded CVG Scholar Award and American Heart Association Postdoctoral Fellowship
- Priscila Navarro (Yu Lab) promoted to Lab Manager
RECENT PUBLICATIONS
Baskin Lab
- Dylan Chiu: Organelle-Selective Membrane Labeling through Phospholipase D-Mediated Transphosphatidylation.
- Weizhi Yu: A Chemoproteomics Approach to Profile Phospholipase D-Derived Phosphatidyl Alcohol Interactions.
- Dylan Chiu: Imaging and Editing the Phospholipidome.
Bretscher Lab
- Abigail Sulpizio: Generation and characterization of conditional yeast mutants affecting each of the 2 essential functions of the scaffolding proteins Boi1/2 and Bem1.
- Robert Gingras: High-resolution secretory timeline from vesicle formation at the Golgi to fusion at the plasma membrane in cerevisiae.
Fromme Lab
- Carolyn Highland: Methods for Studying Membrane-Proximal GAP Activity on Prenylated Rab GTPase Substrates.
- Saket Bagde: The TRAPP Complexes: Discriminating GTPases in Context.
- Ryan Feathers: Structure of the RhlR-PqsE complex from Pseudomonas aeruginosa reveals mechanistic insights into quorum-sensing gene regulation.
Han Lab
- Sasidhar Karuparti/Ann Yeung: A toolkit for converting Gal4 into LexA and Flippase transgenes in Drosophila.
Lammerding Lab
- Jan Lammerding: Mechanobiology of the cell nucleus.
Yu Lab
- Yuan Liu/Shagun Gupta/Mauricio Paramo: A comprehensive SARS-CoV-2-human protein-protein interactome reveals COVID-19 pathobiology and potential host therapeutic targets.
RECENT GRANT AWARDS
Han Lab
- USC / NIH NINDS (Dickman) “Generating functional diversity from molecular homogeneity at glutamatergic synapses”
Lammerding Lab
- CVG Seed Grant “Applying Genomics Approaches to Study Nuclear Mechanotransduction”
- Cornell-NUS Global Strategic Collaboration Award “The juice is worth the squeeze: The role of chromatin architecture in confined migration-induced phase separation”
Smolka Lab
- Cornell-HKUST Global Strategic Collaboration Award “CryoEM structures of eukaryotic DNA replication complexes”
Yu Lab
- CCFI Seed Grant (Bogdanove) “Recognition of pathogen-delivered transcription activator-like effectors by the NLR immune receptor Xo1 in rice”
UPCOMING EVENTS
- February 2nd: Molecular Cell Bio Group, 226 Weill Hall (4pm)
- Bryce Brownfield (Fromme Lab) “Auto-inhibitory interactions of the Arf GEF Sec7, master regulator of the Golgi complex”
- Martin Graef (MBG) “Mechanisms and functions of autophagy”
- February 9th: Weill Institute Diversity Council Meeting, 221 Weill Hall (11:30am)
- February 16th: Weill Institute Happy Hour, Weill Hall 3rd Floor Atrium (4pm)
OCTOBER 2022:
WELCOME
- Gaby Castro: Student Administrative & Communications Assistant
- Qi-Nan Chen: Postdoctoral Associate, Han Lab
- Louise Wang: Student Administrative & Communications Assistant
FAREWELL
- Hui Ji, Han Lab: Stanford University at Palo Alto, Luo Lab
CONGRATULATIONS
- Saket Bagde (Fromme Lab) awarded ASCB Porter Prize for Research Excellence and Spicer Young Investigator Award
- Misha Kazi (Doerr Lab) awarded Nancy M. and Samuel C. Fleming Research Fellowship
- Yugandhar Kumar (Yu Lab) promotion to Research Associate
- Jan Lammerding named ASCB Fellow, granted BMES Grade of Fellow distinction, and awarded ENG Canaan Family Award for Excellence in Academic Advising
- Yingzheng Jason Wang (Smolka Lab) awarded Nancy M. and Samuel C. Fleming Research Fellowship
RECENT PUBLICATIONS
Baskin Lab
- Xiaofu Cao: Proximity Labeling Reveals Spatial Regulation of the Anaphase-Promoting Complex/Cyclosome by a Microtubule Adaptor.
- Brittany White: Lipid Expansion Microscopy.
Fromme Lab
- Arnold Muccini: Structural basis for activation of Arf1 at the Golgi complex.
Hu Lab
- Mariela Nunez Santos: Progranulin-derived granulin E and lysosome membrane protein CD68 interact to reciprocally regulate their protein homeostasis.
Lammerding Lab
- Chieh-Ren Hsia: Confined migration induces heterochromatin formation and alters chromatin accessibility.
Smolka Lab
- Diego Dibitetto: DNA-PKcs promotes fork reversal and chemoresistance.
Yu Lab
RECENT GRANT AWARDS
Doerr Lab
- NSF ENG (Hernandez) “EFRI ELiS: Mechanically Adaptive Living Structural Materials”
Lammerding Lab
- MIT / NIH NCI (Kamm) “Characterizing the functional consequences of mechanical stress during tumor cell extravasation using in vitro microfluidic models”
Roeder Lab
- NSF BIO “URoL:EN: Convergence of biology and architecture: how emergent system dynamics generate adaptable, robust, and resilient forms”
UPCOMING EVENTS
- October 6th: Weill Institute Diversity Council Meeting, Weill Hall 421 (12pm)
- October 18th: Weill Institute Science Workshop – Megan Keller The art of story telling in science communication, Weill Hall 224 (4pm)
- October 20th: Weill Institute Happy Hour, Weill Hall 3rd Floor Lounge (4pm)
- October 24th: Weill Institute Career Workshop Alumni Panel, Zoom (4pm)
AUGUST 2022:
WELCOME OUR NEW COLLEAGUES
- Rhiannon Clements, Laboratory/Research Technician, Han Lab
- Karly Hooper, Laboratory/Research Technician, Lammerding Lab
- Parker Jarman, Laboratory/Research Technician, Han Lab
- Yifan Shen, CCB Graduate Student, Han Lab
- Jason Wang, Postdoctoral Associate, Smolka Lab
FAREWELL & CONGRATULATIONS
- Sudeep Banjade, Emr Lab: Proteovant Therapeutics (Philadelphia, PA)
- Jeremy Keys, Lammerding Lab: Northwestern University (Evanston, IL)
- Arnold Muccini, Fromme Lab: Biogen (Boston, MA)
- Jung-Ho Shin, Doerr Lab: International Flavors & Fragrances (Philadelphia, PA)
- Abigail Sulpizio, Bretscher Lab: Evozyne (Chicago, IL)
- Reika Tei, Baskin Lab: Stanford University (Stanford, CA)
- Riasat Zaman, Bretscher Lab
RECENT AWARDS & PROMOTIONS
- Jeremy Baskin, promotion to Associate Professor, Chemistry & Chemical Biology
- Tuancheng Feng, promotion to Research Associate, Hu Lab
- Chris Fromme, promotion to Professor, Molecular Biology and Genetics
- Marcus Smolka, appointed Interim Director Weill Institute for Cell and Molecular Biology
- Adrienne Roeder, appointed Interim Associate Director Weill Institute for Cell and Molecular Biology
- Noam Zuela-Sopilniak, promotion to Research Associate, Lammerding Lab
RECENT PAPERS & GRANT AWARDS
Baskin Lab
Emr Lab
- Immunoisolation of Endosomal Recycling Vesicles from Saccharomyces cerevisiae.
- Adaptor linked K63 di-ubiquitin activates Nedd4/Rsp5 E3 ligase.
Hu Lab
- NIH NIA R21 “Investigating the role of progranulin in TDP-43 proteiopathy”
Lammerding Lab
- Can’t handle the stress? Mechanobiology and disease.
- Low lamin A levels enhance confined cell migration and metastatic capacity in breast cancer.
Mao Lab
- NIH NIGMS R01 “Di-ubiquitin modification of ubiquitin ligase adaptors in membrane protein downregulation”
Smolka Lab
Yu Lab
- The Simons Foundation SFARI “Cell-type-specific interactome disruption prioritize risk missense mutations for ASD”
UPCOMING EVENTS
- August 5th: Cell Biology Journal Club, Weill Hall 421 (12pm)
- August 9th: Weill Institute Retreat, Greek Peak Mountain Resort – Cortland, NY (8am-5pm)
JUNE 2022:
WELCOME TO OUR NEW COLLEAGUES IN THE WEILL INSTITUTE
- Anna Allen, BMCB Graduate Student, Fromme Lab
- Yuan-Ting Cho, C&CB Graduate Student, Baskin Lab
- Vrushali Fangal, CB Graduate Student, Yu Lab
- Nathan Frederick, C&CB Graduate Student, Baskin Lab
- Michelle Heeney, PB Graduate Student, Roeder Lab
- Yiyang Jin, BMCB Graduate Student, Yu Lab
- Julia Li, C&CB Graduate Student, Baskin Lab
- Cindy Liu, BMCB Graduate Student, Hu Lab
- Yilin Liu, CB Graduate Student, Yu Lab
- Ryan Vignogna, Postdoctoral Associate, Fromme Lab
- Mateusz Wagner, BMCB Graduate Student, Smolka Lab
FAREWELL & CONGRATULATIONS
- Rob Gingras, Bretscher Lab: Manus Bio (Cambridge, MA)
- Ethan Sanford, Smolka Lab: Q2 Solutions (Ithaca, NY)
- Shayne Wierbowski, Yu Lab: Pfizer
- Weizhi Yu, Baskin Lab: WuXi Biologics (Cranbury, NJ)
RECENT AWARDS & PROMOTIONS
- Jumana Badar, awarded Graduate Diversity and Inclusion Community Outreach Award, Smolka Lab
- Sudeep Banjade, promotion to Research Associate, Emr Lab
- Ari Broad, awarded NSF Graduate Research Fellowship, Fromme Lab
- Ryan Feathers, ASBMB Advocacy Training Program delegate, Fromme Lab
- Michelle Heeney, awarded NSF Graduate Research Fellowship, Roeder Lab
- Julia Li, awarded NSERC Postgraduate Doctoral Scholarship, Baskin Lab
- Mariela Nunez Santos, awarded Provost Diversity Fellowship, Hu Lab
- Bryon Rusnak, awarded NSF Graduate Research Fellowship, Roeder Lab
- Sho Suzuki, promotion to Research Associate, Emr Lab
- Reika Tei, awarded Tunis Wentink Prize, Baskin Lab
RECENT PAPERS & GRANT AWARDS
Baskin Lab
- NIH NIGMS R01 “Spatiotemporal control of ubiquitination by phosphoinositide-binding proteins”
- Phosphoinositide phosphorylation sans kinase.
Emr Lab
Fromme Lab
Lammerding Lab
- Assembly and Use of a Microfluidic Device to Study Nuclear Mechanobiology During Confined Migration.
Yu Lab
- NIH NIA R01 “Genome-wide identification and characterization of Alzheimer’s Disease-associated enhancers”
UPCOMING EVENTS
- June 7th: Weill Science Workshop – Will Comstock, Smolka Lab
- June 14th-16th: Keck Biomembrane Retreat
- June 20th: Juneteenth (Staff Holiday)
- July 4th: Independence Day (Staff Holiday)
APRIL 2022:
RECENTLY FUNDED
- Chun Han – NIH NINDS R21 “Mechanisms of natural phosphatidylserine exposure in the nervous system”
- Chun Han – NIH OD R24 “MAGIC tools for genome-wide mosaic analysis with existing Drosophila resources”
- Fenghua Hu – NIH NINDS R01 Renewal “Lysosomal function of progranulin and neurodegeneration”
- Adrienne Roeder – NSF MCB “NSF-ANR: The Biophysical Basis of Flat Organ Morphogenesis From Fluctuating Cellular Growth (GrowFlat)”
WELCOME
- Misha Kazi, Postdoctoral Associate, Doerr Lab
- Katie Munechika, BME Graduate Student, Yu Lab
CONGRATULATIONS
- Carolline Ascencao, awarded ASCB International Training Scholarship, Smolka Lab
- Shagun Gupta, 2022 3MT Competition Finalist, Yu Lab
- Jan Lammerding, inducted 2022 AIMBE Fellow, Lammerding Lab
- Mariela Nunez-Santos, inducted 2022 Cornell Graduate School Bouchet Scholars, Hu Lab
- Masaaki Uematsu, awarded Human Frontiers Science Program fellowship, Baskin Lab
- Masaaki Uematsu, awarded Japan Society for the Promotion of Science Overseas Research Fellowship, Baskin Lab
- Min Wan promoted to Research Associate, Mao Lab
- Xiaochun Wu promoted to higher level Technician, Mao/Hu Labs
- Wenjie Zeng, awarded Sadov Graduate Student Fellowship, Mao Lab
UPCOMING EVENTS
- April 5th, 2pm, Room 224: Weill Institute Science Workshop – Shiying Huang “Introduction to pooled genome-wide CRISPR screening”
- April 28th, 4pm, Room 226: Membrane Signaling Group – TBD
RECENTLY PUBLISHED
Baskin Lab
- Click chemistry and optogenetic approaches to visualize and manipulate phosphatidic acid signaling.
- A palmitoylation code controls PI4KIIIα complex formation and PI(4,5)P2 homeostasis at the plasma membrane.
- Activity-based, bioorthogonal imaging of phospholipase D reveals spatiotemporal dynamics of GPCR-Gq signaling.
Bretscher Lab
Doerr Lab
- High-level carbapenem tolerance requires antibiotic-induced outer membrane modifications.
- Lytic transglycosylases mitigate periplasmic crowding by degrading soluble cell wall turnover products.
Han Lab
Hu Lab
- TMEM106B deficiency impairs cerebellar myelination and synaptic integrity with Purkinje cell loss.
- Differential regulation of progranulin derived granulin peptides.
- Regulation of lysosomal trafficking of progranulin by sortilin and prosaposin.
Roeder Lab
- Cytokinin-CLAVATA cross-talk is an ancient mechanism regulating shoot meristem homeostasis in land plants.
- Stepping on the molecular brake: Slowing down proliferation to allow differentiation.
- Fifteen compelling open questions in plant cell biology.
Smolka Lab
Yu Lab
- Deep learning methods for 3D structural proteome and interactome modeling.
- Advancing discovery of risk-altering variants for complex diseases by functionally informed fine-mapping.
- A comparison of experimental assays and analytical methods for genome-wide identification of active enhancers.
- Implications of disease-related mutations at protein-protein interfaces.
- A full-proteome, interaction-specific characterization of mutational hotspots across human cancers.